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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915597.1_cds_XP_016465393.1_58351
CDS Infomation

[gene=LOC107788232] [db_xref=GeneID:107788232] [protein=vacuolar cation/proton exchanger 2-like] [protein_id=XP_016465393.1] [location=join(15109..15378,15489..15556,15647..15675,16584..16780,16964..17176,17399..17533,19275..19391,19464..19517,19759..19860)] [gbkey=CDS]
Sequence

ATGGGATCTGCTGGGGAGAAACTAGAACTTGAATCTGATGAGGAGATTCCATTTAGCTCA
TCTCAGGCTACTAATAAAATGGACACTCTGCACTATGAGGCACCTCATATTGCCTCACCC
AGAGGTTATCGCTCCTCTAGGGTGTTAAGAAAGATGTACCAGATCAGCCTTTTAAGGAGT
ATATATGTTGTTATTATCAAAGCAAAGATCAATGTGTTGCTTCCTTTTGGTCCCCTGGCC
ATATTGCTTCACTATGTTACTGGAAAATATGCTTGGGTCTTTTTCTTCAGTTTACTTGGT
ATTACACCTTTAGCTGAGCGATTGGGTTATGCGACTGAGCAGCTCGCATTCTATACGGGG
CCAACAGTTGGGGGCCTTCTGAATGCTACATTTGGCAATGCAACTGAAATGATAATCTCA
TTATATGCATTGAACAACGGAATGATGCGGGTTGTTAAACAATCCTTGTTGGGTTCCATT
TTATCGAATATGCTCTTGGTGCTTGGGTGTGCTTTCTTCAGTGGTGGGATTATTCATCAC
CAGAAAGTCCAGGTGTTCAATAAGGCGACTGCCATTGTGAACTCAGGATTGTTGTTGATG
GCAGTCATGGGCTTATTATTTCCAGCTGTACTTCATTTCACCCACACGGAAGTGCATTTT
GGCAAGTCACAGTTGGCTCTTTCAAGATTTAGCAGTTGCATAATGCTGGTAGCATATGCA
AGCTACCTATTCTTTCAGCTCAAGAGTCAACCTGATCTGTATAGCTCCGTGGGCGAGGAT
ATAGAAAATAATCCAGAAAATTCTGAAGAAGAAGAGGCGCCTGAGATAACCCAGTGGGAA
GCTATTGGGTGGCTTGCTGTTTTGACAATATGGATATCAGTGCTATCTGGATATCTGGTA
GATGCCATCGAGGGTGCATCTGACTCGTTGAACATGCCCATGTCCTTTATTAGTGTCATC
TTGCTTCCAATTGTAGGAAATGCGGCAGAACACGCCAGCGCAATCATGTTTGCGATGAAA
GATAAGCTTGACATCACGCTTGGAGTTGCAATTGGGTCATCTACTCAGATATCAATGTTT
GTGATACCGTTTTGTGTTGTTGTTGGTTGGTTTATGGGAAAGCCCATGGACTTGAATTTC
CAATTATTTGAGACTGCTACACTCTNGTTGCTTTACATGTTGTAG

Peptide Sequence

PEP ID

XP_016465393.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 2-like [Nicotiana tabacum]
Sequence

MGSAGEKLELESDEEIPFSSSQATNKMDTLHYEAPHIASPRGYRSSRVLRKMYQISLLRS
IYVVIIKAKINVLLPFGPLAILLHYVTGKYAWVFFFSLLGITPLAERLGYATEQLAFYTG
PTVGGLLNATFGNATEMIISLYALNNGMMRVVKQSLLGSILSNMLLVLGCAFFSGGIIHH
QKVQVFNKATAIVNSGLLLMAVMGLLFPAVLHFTHTEVHFGKSQLALSRFSSCIMLVAYA
SYLFFQLKSQPDLYSSVGEDIENNPENSEEEEAPEITQWEAIGWLAVLTIWISVLSGYLV
DAIEGASDSLNMPMSFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMF
VIPFCVVVGWFMGKPMDLNFQLFETATLXLLYML

Transcript Sequence

Gene sequence data has not been registered.